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VarScan (free) Download Full | **UPDATE

Variant detection in next-generation sequencing data - VarScan

VarScan (free) Download Full | **UPDATE

Published Date: 2024-04-14

VarScan Free Download

VarScan is a free, open-source software program that can be used to analyze high-throughput sequencing data. It is designed to identify and characterize somatic variants, such as single-nucleotide variants (SNVs), insertions and deletions (INDELS), and copy number variants (CNVs). VarScan is a powerful tool that can be used for a variety of research applications, including cancer genomics, population genetics, and evolutionary biology. To download VarScan (free) download the full version, visit the VarScan website. The website provides documentation, tutorials, and other resources to help you get started with VarScan.

VarScan is a versatile software program that can be used to analyze a variety of sequencing data types, including whole-exome sequencing (WES), whole-genome sequencing (WGS), and targeted sequencing panels. It is also compatible with a variety of file formats, including BAM, SAM, and CRAM. VarScan is a well-maintained software program that is regularly updated with new features and bug fixes. The VarScan team is also very responsive to user feedback. If you have any questions or problems using VarScan, you can contact the team through the VarScan website.

VarScan: Variant detection in massively parallel sequencing. For one sample, calls SNPs, indels, and consensus genotypes. For tumor-normal pairs, further classifies each variant as Germline, Somatic, or LOH, and also detects somatic copy number changes. THE LATEST VERSION IS AVAILABLE ON GITHUB